I don't know if it will help, but have you tried a NoCD executable? Since it appears you legally own the game, I think you would be allowed to do that.
Just tried a 1.1 NoCD .exe and nothing's changed. It still gives me the error, unfortunately. :c I really want to play this mod. Damn computers and games and work-in-progress stuff being all prone to not working properly and such... :/
Any other ideas I could try? I've tried compatibility mode, running as admin, turning off DEP for the .exe, the aforementioned registry cleaning. I personally can't think of anything else, but the internet frequently has more and better ideas than myself.